host defense: complex balance, requires recognition of self vs non-self, protects against disease while maintaining beneficial relationships
saprophytic: free living microbes
parasitic: microbes requiring a host
some saprophytes may exist in higher order hosts due to better living conditions
99.99% bacteria live outside a host
host-microbe interactions are dynamic interactions based on the characteristics of the microbe and the host
host-microbe interactions are dependent on host range
only a fraction of microbial species are associated with humans
human microbiome normal flora include commensals, opportunistic, and pathogenic microbes
commensals have a beneficial or neutral relationship with the host
opportunistic microbes, given the right circumstances can lead to infection
pathogenic microbes always cause disease
human microbiome influencing factors include: diet, antibiotics, anatomic abnormalities, genetic differences, hormonal changes, age, and lifestyle
the human microbiome is beneficial because it provides protection from pathogens, stimulation of gut maturation, stimulation of innate and adaptive immunity, expansion of nutritional diversity, and digestion of complex carbohydrates
the human microbiome provides protection from pathogens because stable ecosystems resist introduction or overgrowth of pathogens at epithelial surfaces
consequences of the microbiome: foot odor, flatulence, body odor, bad breath, opportunistic disease, transfer antibiotic resistance genes
disease is any condition in which the normal strucutre or functions of the body are damaged or impaired
physical injury and disabilities are not classified as disease
disease causes include infection, genetics, environmental, and immune responses
infection: successful colonization of host by a microorganism, can lead to disease
pathogens: organisms that cause disease
virulence: degree of pathogenicity
stages of pathogenesis: exposure, adhesion, invasion
exposure: encounter with pathogen, requires portal of entry to gain access to target tissue
adhesions: attachment to body cells, mediated through adhesins, binds to receptors on host cells, or biofilms can act as adhesions