In the LIR of photosynthesis, carbon dioxide enters the stroma, reacting with a molecule called ribulose bisphosphate (RuBP), which has 5 carbons. This reaction is catalysed by an enzyme called rubisco and forms 2 molecules of glycerate 3-phosphate (GP), which have 3 carbons each.Glycerate 3-phosphate is converted into triose phosphate (TP), which has 3 carbons. This reaction requires reduced NADP and ATP from the LDR NADP, ADP and Pi produced in this reaction return to the thylakoid membrane to be used up in the LDR to produce new molecules of reduced NADP and ATP.Roughly 20 of the triose phosphate molecules made are used to produce a range of useful organic substances, such as glucose, amino acids and glycerol.
The majority of triose phosphate, however, is used to reform ribulose bisphosphate, ensuring that the LIR can continue. This reaction requires energy in the form of ATP.