Embedding involves placing the tissue into a solidifying medium (e.g., paraffin wax) to hold its shape during sectioning.
Fixation
Small pieces of tissue are placed in solutions of chemicals that cross-link proteins and inactivate degradative enzymes, which preserve cell and tissue structure
Preparation of tissues for study
1. Fixation
2. Dehydration
3. Clearing
4. Infiltration
5. Embedding
6. Trimming
Formalin
Buffered isotonic solution of 37% formaldehyde, a widely used fixative for light microscopy
Glutaraldehyde
A fixative used for electron microscopy, reacts with amine groups of proteins and cross-links adjacent proteins
Electron microscopy
Provides much greater magnification and resolution of very small cellular structures, requires careful fixation to preserve additional "ultrastructural" detail
Preparing tissue for electron microscopy
1. Glutaraldehyde treatment
2. Immersion in buffered osmium tetroxide
Paraffin
Used routinely for embedding tissues for light microscopy
Plastic resins
Used for embedding tissues for both light and electron microscopy
Embedding and sectioning
1. Dehydration
2. Clearing
3. Infiltration with paraffin or plastic resin
4. Embedding
5. Trimming
6. Sectioning on a microtome
Microtome
Instrument used for sectioning paraffin-embedded tissues for light microscopy
Cryostat
Microtome used to section rapidly frozen tissue samples for quick analysis
Staining
Methods used to make various tissue components conspicuous and distinguishable under the microscope
Basophilic
Cell components with a net negative charge that have an affinity for basic dyes
Acidophilic
Cationic cell components that stain more readily with acidic dyes
Basic dyes
Toluidine blue, alcian blue, methylene blue
Acid dyes
Eosin, orange G, acid fuchsin
Hematoxylin and eosin (H&E)
Simple and commonly used staining method, hematoxylin stains DNA and RNA-rich areas blue/purple, eosin stains other cytoplasmic structures and collagen pink