Mid sem exam

Cards (222)

  • DNA that encodes information for proteins is within the ________
    nucleus
  • What makes up the transcription complex that transcribes DNA?
    Polymerases and transcription factors
  • Transcriptional complexes transcribe DNA into _______
    mRNA
  • ________________ machinery reads mRNA after it has been shuttled into the cytoplasm
    translational
  • Where are ribosomes formed?
    nucleus
  • ______________ make up the translational machinery that reads mRNA
    Ribosomes
  • The amino acid chain that forms the protein is the _____________ structure of a protein
    primary
  • Alpha helices or beta helices structures are examples of ______________ protein structures
    secondary
  • Structural __________ are formed by combinations of secondary structures.
    motifs
  • A fully folded single protein is in its _______________ structure
    tertiary
  • Proteins often interact with one another to form _______________
    complexes
  • Two proteins that come together to form a dimer, homo-dimer, trimer or heteroligamers are examples of proteins in their _________________ structure
    quaternary
  • Forming quaternary structures allows proteins to enhance ____________ or stability
    function
  • The ___________ structure of viral hemaglutinin occurs when _____ individual trimers connect to improve function and stability of the viral protein structure
    trimeric
  • What unit of measurement are individual proteins usually measured in?
    kDa (kilodaltons)
  • What unit of measurement are individual protein complexes or machines usually measured in?
    mDa (megadaltons)
  • S units represent ___________ units and is a non-linear measurement of proteins that measures the rate of sedimentation
    Svedberg unit
  • Macromolecular complexes are typically ____ to ____nm in size
    30-300
  • How many components make up a ribosome?
    ~100 sub units
  • A dimer is made up of ____ protein sub units
    2
  • Assembly around a ___________ sub unit is a type of protein assembly that is involved in trimer, dimer formation
    core/central sub unit
  • Mitochondrial electron transport chain complexes form using the mode of assembly in which _____________ sub complexes form prior to full assembly
    individual
  • The different sub-unit components of quaternary proteins each have a different ________ to play. These roles include target recognition or binding, linkers, scaffolding, biomechanical, catalytic/enzymatic or regulatory functions.
    individual
  • A single protein can have multiple ___________ within them. This is because each __________ has a different role or function.
    domain
  • What is the benefit of multi-molecular sub-unit complexes?
    A single protein complex can be swapped out - this means that it is easier than swapping out a chemically linked domain
  • Multi sub-unit complexes facilitate ________ within a system
    complexity
  • Where is the energy contained in ATP?
    High energy phosphate bonds
  • Energy is released from ATP when the terminal phosphate bond is _________
    broken
  • Post-translational modifications are COVALENT modifications that alter proteins through either __________________ or _______________ of the protein

    phosphorylation or ubiquitination
  • In a PTM phosphorylation involves the _________ of a ____________ to amino acids: tyrosine, serine, threonine or histidine residues that are catalyzed by ___________
    addition of a phosphate, kinases
  • In a PTM ubiquitination involves the _________ of a ____________ to amino __________ residues
    addition of a ubiquitin to lysine residues
  • Glycolysation is an example of a ________
    PTM
  • Allosteric regulation is a change in protein structure/function that is due to a ___________________ binding by a ___________
    non-covalent, ligand (e.g. calcium, nucleotides or another protein)
  • Calmodulin and Ca2+ binding is an example of ____________ regulation that opens up a catalytic site on a kinase to allow phosphorylation to occur.
    allosteric
  • GTPase switch is an example of ____________________
    allosteric regulation II
  • What turns ON the GTPase switch to increase enzyme activity, and activate signal transduction by catalyzing the exchange from G-protein-bound GDP to GTP?
    GEF
  • What turns off the GTPase signalling switch by inducing GTP hydrolysis?
    GAP (GTP-ase activating protein)
  • Spatial localization/segregation/compartmentalization is form of ___________ of the cell.
    regulation
  • What are the two sides of the membrane termed? Side facing into the cell cytoplasm is called the _____________ face and the side of the membrane that faces away from the cytoplasm is the ____________ face.

    cytoplasmic, exoplasmic
  • The nucleus and mitochondria are organelles that have a _________ membrane
    dual