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MIDTERMS 1st yr 2nd sem
BIOCHEM
ENZYMES
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ENZYMES
are catalysts and are not consumed in the reactions
SIMPLE ENZYME
: composed only of protein (amino acid chains)
CONJUGATED Enzyme: has a nonprotein part in addition to a protein part
APOENZYME
: Protein part of a conjugated enzyme.
COFACTOR: Nonprotein part of a conjugated enzyme.
HOLOENZYME
: the biochemically active conjugated enzyme
Co-enzymes
are derived from dietary vitamins
Inorganic ion cofactors
derived from dietary minerals
Substrate is the reactant in an enzyme-catalyzed reaction:
Oxidoreductases –
Oxidation-reductions
Transferases
– Functional group transfer reaction
Hydrolases
– Hdrolysis reactions
Lyases
– Reactions involving addition or removal of groups form double bonds
Ligases
– Reactions involving bond formation coupled with ATP hydrolysis
Isomerase
– Isomerisation reactions
OXIDATION
it requires a coenzyme that is either oxidized or reduced as the substrate in the reaction
Oxidoreductase
- LACTATE DEHYDROGENASE
Transferaase
TRANSAMINASES - catalyze transfer of an amino group to a substrate
Transferase
KINASES
- catalyze transfer of a phosphate group from adenosine triphosphate (ATP) to a substrate
Hydrolase
- protease
Lyase
- an enzyme that catalyzes the addition of a group to a double bond or the removal of a group
to form a double bond in a manner that does not involve hydrolysis or oxidation
Lyase -
dehydratase
Isomerase
- rearrangement of atoms
ACTIVE SITE: relatively small part of an enzyme's structure that is actually involved in catalysis
ACTIVE SITE
: Place where substrate binds to enzyme
Lock and key
- Enzyme has a pre-determined shape for the active site
Lock and key - Enzyme has a pre-determined shape for the active site
Induced Fit Model
Substrate contact with enzyme will change the shape of the active site
ABSOLUTE SPECIFICITY
- An enzyme will catalyze a particular reaction for only one substrate
ABSOLUTE SPECIFICITY - MOST RESTRICTIVE OF ALL SPECIFICITIES
Ureases
is an enzyme with absolute specificity
STEREOCHEMICAL SPECIFICITY
- An enzyme can distinguish between stereoisomers.
GROUP SPECIFICITY
-Involves structurally similar compounds that have the same functional groups.
LINKAGE SPECIFICITY
- Involves a particular type of bond irrespective of the structural features in the vicinity of the bond
ENZYME INHIBITOR
: a substance that slows down or stops the normal catalytic function of an enzyme by
binding to it.
COMPETITIVE INHIBITORS
: Compete with the substrate for the same active sitel; Will have similar charge & shape
NONCOMPETITIVE
INHIBITORS: Do not compete with the substrate for the same active sit ; Binds to the enzyme at a location other than active site
Competitive inhibition can be reduced by simply increasing the concentration of the substrate.
A
noncompetitive
enzyme inhibitor decreases enzyme activity by binding to a site on an enzyme other
than the active site.
An irreversible enzyme inhibitor
inactivates
enzymes by forming a strong covalent bond with the
enzyme's active site
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