Biological process by which reduced organic compounds are mobilized and subsequently oxidized in a controlled manner
Primary Role of Respiratory Metabolism
Controlled release of free energy, together with its coupling to the synthesis of ATP
Glycolysis
happens in the cytosol
Starting material: glucose
Products: 2 pyruvate; 4 ATP; 2 NADH
Uses: 2 ATP
TCA Cycle / Krebs Cycle
Starting material: Acetyl CoA
Products: 1 FADH2; 3 NADH; 1 ATP (GTP) 2 CO2
Complex I - oxidizes NADH into NAD+
Complex II - FADH2 is oxidized into FAD+
Complex IV - pass electron to the final electron acceptor (oxygen) to get water
Complex V - ATP synthase
Primary Goal of Cellular Respiration - produce ATP and power other processes
Why need to go through different processes to produce ATP?
To oxidize in a controlled manner to control energy
Another important function of aerobic respiration?
Provides carbon skeletons for biosynthesis of other molecules
Difference of Autotrophic and Heterotrophic Respiration
Starting material for plant respiration comes from the products of photosynthesis
High concentration of sugars and O2 in the plant cell environment requires complex regulation of the flow of these compounds
Plant mitochondria do not only function for cellular respiration. It is also important in maintaining redox balance.
Heterotrophic starting material - Sucrose, starch
Autotrophic starting material - Sucrose, starch, TP, glucose, DHAP
Substrate supply can control the rate of transpiration by regulating substrate available for a particular reaction
If G-6-P is high, reaction are catalyzed by phosphoglucoisomerase shifts towards the formation of Fru-6-P
More sucrose needed = Activates Fructose-1,6-bisphosphatase
If needs glycolysis - activates PP-Fructose-6-phosphate kinase
Fructose-2,6-bisphosphate activates PP-Fructose-6-phosphate kinase hence promoting glycolysis. On the other hand, it also inhibits Fructose-1,6-bisphosphatase thereby inhibiting sucrose formation
Fermentation occurs when oxygen is limiting, and NADH and pyruvate accumulates
Main goal of Fermentation - replenish NADP+ by using NADPH in the process
If there is no oxygen, what will happen to glycolysis, TCA, and ETC
Glycolysis will push through however TCA and ETC will not
When is NAD+ released in Alcoholic Fermentation?
Upon conversion of acetaldehyde into ethanol
When is NAD+ released in Lactic Acid Fermentation?
Upon conversion of pyruvate into lactate
High Level of ATP, inhibits?
ETC, Krebs, and Glycolysis
What activates / promotes ETC?
High level of ADP
High light intensity leads to the formation of ROS since there is high concentration of NADPH and low NADP+; hence, the electrons will bind with oxygen
Pathways plant utilize to prevent formation of ROS
Cyclic Electron Flow - electron will be brought back in Cytochrome b6f thus producing more ATP
Thermal Dissipation - carotenoids will accept electron since it does not have enough energy to excite oxygen
Reason why NADPH cannot easily go out of chloroplast?
NADPH is impermeable in the membrane and does not have transporter
Malate-Oxaloacetate Shuttle
The chloroplast uses NADPH to oxidizeOxaloacetate into Malate
Malate will go to the cytosol; then, will be converted into Oxaloacetate and producing NADH in the process
OMT / DCT
Oxoglutarate-malate transporter through nitrogen assimilation
Uses NADPH / NADH to remove malate or other compounds from the chloroplast that are capable of releasing NADH in the cytosol
Triose Phosphate-Phosphate Transporter
Increased rate of Calvin Cycle so that more NADPH is used in the chloroplast
TPT transports more 3-PGA in the cytosol
TP are exported to the cytosol for sucrose synthesis
P are imported to the chloroplast for photophosphorylation
Glycolate / Glycerate Shuttle
Photorespiration uses NADPH in the process to relieve excess reductant in the chloroplast
RUBP is oxygenated forming glycolate. Glycolate is transported into the peroxisome and will be converted into Glycine.
Glycine arrives in the mitochondrion and is converted into serine. In this process, NAD+ is used to produce NADH
Photorespiration
aids in reducing excess reactants
has 0 NET NADH
NADH from the chloroplast are used in the peroxisome and mitochondrion
Alternate Electron Pathways in Plants
External NAD(P)H Dehydrogenase
Retonone-Insensitive NADH Dehydrogenase
Cyanide-resistant Respiration
External NAD(P)H Dehydrogenase
Faces the intermembrane space of the mitochondrion
Electron enter the main ETC at the ubiquinon level (bypass Complex I)
Oxidizes NADH from the cytosol through external dehydrogenases
Does not increase proton gradient = no ATP synthesis
Retonone-Insensitive NADH Dehydrogenase
Inner surface of the membrane
will only oxidize internal NADH (from TCA or conversion of Glycine to Serine)
E- is passed to the ubiquinone = no proton gradient = no atp synthesis
Cyanide-Resistant Respiration
Alternative Respiratory Pathway
Involves an oxidase (Alternative Oxidase / AOX) that is insensitive to the inhibition of cyanide, azide, or carbon monoxide
AOX works like Complex IV (electrons to oxygen = water)