Glycocalyx (external to cell wall, viscous and gelatinous, made of polysaccharide and/or polypeptide)
Flagella (filamentous appendages external to cell, propel bacteria, made of protein flagellin, have filament, hook, and basal body)
Axial filaments (also called endo-flagella, found in spirochetes, anchored at one end, rotation causes corkscrew movement)
Fimbriae (hairlike appendages for attachment)
Pili (involved in motility like gliding and twitching, also involved in conjugation and DNA transfer)
Cell wall
Prevents osmotic lysis and protects cell membrane, made of peptidoglycan (in bacteria), contributes to pathogenicity
Protoplast
Wall-less gram-positive cell
Spheroplast
Wall-less gram-negative cell
L forms
Wall-less cells that swell into irregular shapes
Plasma (cytoplasmic) membrane
Phospholipid bilayer that encloses cytoplasm, has peripheral and integral/transmembrane proteins
Nucleoid
Bacterial chromosome (circular thread of DNA with genetic information), plasmids (extrachromosomal genetic elements)
Ribosomes
Sites of protein synthesis, made of protein and ribosomal RNA, 70S (50S + 30S subunits)
Inclusions
Metachromatic granules (phosphate reserves)
Polysaccharide granules (energy reserves)
Lipid inclusions (energy reserves)
Sulfur granules (energy reserves)
Carboxysomes (RuBisCO enzyme for CO2 fixation during photosynthesis)
Gas vacuoles (protein-covered cylinders that maintain buoyancy)
Magnetosomes (iron oxide inclusions that destroy H2O2)
Endospores
Resting cells produced when nutrients are depleted, resistant to desiccation, heat, chemicals, and radiation, produced by Bacillus and Clostridium
Bacterial cell size and shape
Average size 0.2-2.0 μm diameter, 2-8 μm length, most are monomorphic (single shape), some are pleomorphic (many shapes), common shapes include bacillus (rod), coccus (spherical), spiral, vibrio, spirillum, spirochete, star-shaped, rectangular
Periplasm between outer membrane and plasma membrane contains peptidoglycan, outer membrane made of polysaccharides, lipoproteins, and phospholipids, protects from phagocytes, complement, and antibiotics, made of lipopolysaccharide (LPS) with O polysaccharide antigen and lipid A endotoxin, has porins (protein channels)
Differences between gram-positive and gram-negative cell walls
Gram-positive: 2 rings in basal body of flagella, produce exotoxins, high susceptibility to penicillin, disrupted by lysozyme
Gram-negative: 4 rings in basal body of flagella, produce endotoxins and exotoxins, low susceptibility to penicillin
Acid-fast cell walls
Like gram-positive, waxy lipid (mycolic acid) bound to peptidoglycan, found in Mycobacterium and Nocardia, stain with carbolfuchsin
Mycoplasma cell walls
Lack cell walls, have sterols in plasma membrane
Archaea cell walls
Wall-less, or walls of pseudomurein (lack NAM and D-amino acids)
Taxonomy
The science of classifying organisms
Taxon
A group of organisms
Phylogeny
The study of the evolutionary history of organisms
Limitations of a two-kingdom classification system
Scientific names are used to provide a consistent way to identify organisms
The Study of Phylogenetic Relationships
1. Taxonomy shows degree of similarity among organisms
2. Systematics, or phylogeny, is the study of the evolutionary history of organisms
Linnaeus proposed kingdoms Plantae and Animalia
1735
Bacteria and fungi put in kingdom Plantae (Nägeli); Kingdom Protista proposed for bacteria, protozoa, algae, and fungi (Haeckel)
1800s
Prokaryote introduced to distinguish cells without a nucleus
1937
Murray proposed Kingdom Prokaryotae
1968
Whittaker proposed five-kingdom system
1969
Eukarya
Domain containing animals, plants, and fungi
Bacteria
Domain containing prokaryotic cells
Archaea
Domain containing methanogens, extreme halophiles, and hyperthermophiles
Eukaryotes originated from infoldings of prokaryotic plasma membranes