thylakoids -> flattened disc sacksstacked on top of each other to form grana
intergranal lamellae -> tubularextensions that join thylakoids in adjacent grana
stroma -> fluidfilled matrix
starch grain -> stores photosyntheticproducts
light dependent reaction location
thylakoids
light independent reaction location
stroma
photosynthetic pigments
absorb a range of wavelengths of light to maximise photosynthesis
primary pigment
chlorophyll a
accessory pigments
chlorophyl b
carotenoids ( carotene and xanthophylls )
processes in non-cyclic only
reduction of NADP
photolysis of water
photoionisation
energy from photons of light are absorbed by photosynthetic pigments in photosystem 2
this excites the electrons by raising them to a higher energy level
causing them to be released from the pigments
cyclic phosphorylation electron transport chain
the higher energy electrons are received by an electron acceptor and are passed down a series of carrierproteins embedded in the thylakoid membrane and undergo a series of redox reactions which releases the energy needed to convert ADP to ATP
chemiosmosis theory in cyclic phosphorylation
H+ are pumped into the thylakoid space from the stroma
they move down their concentration gradient via a transmembrane channel protein known as ATP synthase which catalyses the condensation reaction of ADP into ATP
non-cyclic phosphorylation
photosystems 1 and 2
excited electrons enter the ETC to produce ATP from ADP and Pi
water is then photolysed to release electrons to replace the ones removed from photosystem 2
NADP acts as the final electron acceptor and is reduced to NADPH using the protons dissociated from the water molecule
purpose of cyclic phosphorylation
to produce additional ATP to meet the surplus energy demands of cells
photolysis of water
2 H2O -> 4 H+ + 4 e- + O2
reduction of NADP
NADP + 2H+ + 2 e- -> NADPH
catalysed by dehydrogenase enzymes
in the stroma of chloroplasts
light independent vs light dependent
LID:
CO2 as an input
triose phosphate as an output
LD:
light and water as an input
ATP O2 and reduced NADPH as an output
three stages in the light independent reaction
carbon fixation
reduction
regeneration
carbon fixation
reaction between carbon dioxide and ribulosebisphosphate
catalysed by RibuloseBisphosphateCarboxylase (RuBisCo)
produces two glycerate 3-phosphate (GP)
reduction
both glycerate 3-phosphate are reduced to twotriose phosphate
requires 2 ATP and 2 NADPH
forms 2 ADP and 2 NADP
role of triose phosphate in the light independent reaction
raw material: some leaves the calvin cycle to produce organic substances such as amino acids and monosaccharides
regeneration: RibulosePhosphate is converted into Ribulose Bisphosphate using energy from ATP
light independent reaction break down
CO2 + RuBP -> 2 GP
using RuBisCo
2 GP -> 2 TP
using 2 ATP and 2 NADPH
2 TP -> RuP -> RuBP
using ATP
what is TP also known as
GALP
number of carbon atoms in GP TP and RuBP
(in order in question)
3
3
5
limiting factor
a factor that determines the maximum rate of reaction
limiting factors of photosynthesis
light intensity (LD stage)
CO2 levels (LID stage)
temperature (reduction of GP to TP)
magnesium (chlorophyll)
light intensity
slowerlight dependent reaction
less ATP and NADPH produced to convert GP into TP
GP levels rise as they are not being converted into TP
TP and RUBP fall as they are not being made and regenerated
carbon dioxide levels
rate of RuBP into GP slows down
levels of RuBP increases
levels of GP and TP decrease
principle of paper chromatography
molecules in a mixture are separated by their relative attraction to the mobile phase compared to the stationary phase
assuming 8.5 × 1018 Bq are generated by each 14C atom in the molecule, how many new TP molecules are produced after 30 seconds in the dark?
find difference between light and dark reactions
( 10.1 - 5.5 = 4.6 )
4.6 x 10 27 divided by 8.5 x 10 18 = 541176470.6
as TP contains 3 carbon atoms you have to divide by 3
541176470.6 divided by 3 = 1.8 x 10 8
role of accessory pigments
pass energy to a reaction center
where primary pigments are then oxidised to release electrons into the electrontransport chain
why do aquatic photosynthetic organisms need to have pigments different from terrestrial photosynthetic organisms
absorb shorter wavelengths as some wavelengths of light won't reach their depth