effect of genetic differences in multiple genes across the genome on drug response
how gene influence drugs PK
altering expression or function of proteins involved in ADME of drug, to much or to little drug at site of action
how genes influence drugs PD
altering expression or function of drugs target (receptors) or their downstream pathways, increase or decrease effect from drug
polymorphic gene
monogenic variant of population level, greater than 1%
SNPs
single base mutation (polymorphism), frequency increase if advantageous
sites of SNPs
upstream regulatory regions (promotor or enhancer) - change expression of proteins
coding region (exons) - change activity of protein
favism
after eating fava beans some people jaundice and had red urine was a result of haemolytic anaemia
cause of favism
due to G6PD deficiency, the gene is highly polymorphic and changes activity of enzyme
what dose G6PD do
catalyses first reaction of pentose phosphate pathway, produces NAPDH which provides reducing power in cells via glutathione (used to reduce oxidised drugs)
RBCs and G6PD deficiency
RBCs carry oxygen, risk of free radical damage so rely on G6PD, NAPDH, glutathione for protection. G6PD deficiency causes acute haemolytic due to oxidative stress
N-acetyltransferase (NAT2) polymorphism
slow acetylators risk of hepatotoxicity and peripheral neuropathy fast have lower drug bioavailability and poor response
isoniazid
anti TB drug, eliminated by acetylation
abacavir
HIV-1 reverse transcriptase inhibitor, 5% patients serious hypersensitivity reaction immune mediated antigen presentation so must phenotype